Upcoming Workshops - FALL/WINTER 2017

REGISTRATION: use individual links on calendar. See calendar (opens in new TAB or new window) or use embedded version below.

Note: each workshop has to be registered separately.

Check dates offered on calendar above or within individual pages linked below:

Linux Basics for NGS Data Analysis - $95

* Linux Basics workshop is required for all other workshops unless you have similar classes from DoIT or other department, or can assert proficiency.

Intro to NGS Data Analysis 
$140

* Recommended workshop for mRNAseq or ChIP workshop

mRNAseq Workshop 
$190

Recommended workshop for Advanced mRNAseq 

Advanced mRNAseq differential gene expression - $275

Microbiota Processing in mothur  - $175

Microbiota Analysis in R  - $195

Single-cell RNA-seq - $190
TBA - 9am-4pm

ChIPseq Workshop - $190
TBA - 9am-4pm 

*All workshops can be registered on the REGISTRATION PAGE now.
 

The "Linux Basics for NGS data analysis" workshop is an "essential" prerequisite for any of the other workshops. "Intro to NGS Data Analysis" is also recommended, but not required.

* There is a minimal set of software that should be installed on laptops BEFORE attending the workshop. Instructions will be provided to attendees prior to the workshop and can be found within the PDF document: GETTING PREPARED FOR CLASS 

Get yourself ready for data analysis

The following .pdf document contains essential set-up information for the workshops. Download it from the link below.

There are numerous online resources that can help you get started learning Linux and NGS analysis. Here is a list of some useful websites:

Linux:
Software Carpentry The Unix Shell (text format)
Software Carpentry The Unix Shell (Video Lessons - recommended)

Lynda.com Up and Running with Bash Scripting
Standford open classroom Practical Linux 
Linux command cheatsheet for NGS

General Data Analysis:
Standford CS109 Data Science (Current lectures)2013 lecture archive 

Previous workshops

mRNA-seq Data Analysis:
     2017 Mar 3, Apr 7, May 12, June 2, July 19
     2016 Mar 11, Apr 29, July 20, Oct 31
     2015 Mar 12, Apr 24, May 29, Nov 6, Dec 15
     2014 Dec 9, Oct 28, May 12, Mar 18
     2013 Dec 2, Oct 28
Introductory NGS Data Analysis:
     2017 Feb 24, Mar 31, May 5, June 21
     2016 Mar 4, Apr 22, July 15, Oct 24
     2015 Mar 11, Apr 23, May 27, Oct 30, Dec 11
     2014 Dec 5*, Oct 10*, May 9*, Mar 4*
     2013 Oct 14*, Sep 30*, May 6*
Linux Essentials (Stand alone classes)
     2017 Jan 27, Feb 3, Mar 24, Apr 28, May 31, June 19, July 12
     2016 Mar 2, Apr 20, July 6, July 13, Oct 17
     2015 Mar 11, Apr 23, May 28, Oct 23, Dec 4
ChIP-seq Data Analysis:
     2017 July 17
     2015 Mar 13, June 1, Nov 13
     2014 Dec 18
Single Cell RNA-Seq Analysis:
     2016 July 27
Microbiota Processing with mothur:
     2017 Mar 30
     2016 Nov 4
Microbiota Analysis in R:
     2017 Apr 13
     2016 Nov 11

(*) Combined with Linux Essentials